Browse of TCMCG057C48576 protein

CDS

Accession Number	TCMCG057C48576
gbkey	CDS
Protein Id	XP_018458022.1
Location	join(10423714..10423777,10424077..10424306,10424381..10424562,10424880..10425063,10425303..10425393,10425623..10425783,10425892..10425981,10426078..10426239,10426495..10426556,10426724..10426814,10427028..10427191,10427348..10427561,10427676..10428221,10428316..10428528,10428666..10429056,10429143..10429233,10429361..10429445,10429559..10429745,10430042..10430337,10430435..10430525,10430626..10430804)
Gene	LOC108828747
GeneID	108828747
Organism	Raphanus sativus

Protein

Length	1257aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018602520.1
Definition	PREDICTED: trafficking protein particle complex II-specific subunit 130 homolog [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Trafficking protein particle complex subunit 10, TRAPPC10
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko04131        [VIEW IN KEGG]
KEGG_ko	ko:K20307        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000278        [VIEW IN EMBL-EBI] GO:0000281        [VIEW IN EMBL-EBI] GO:0000910        [VIEW IN EMBL-EBI] GO:0000911        [VIEW IN EMBL-EBI] GO:0000919        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005768        [VIEW IN EMBL-EBI] GO:0005794        [VIEW IN EMBL-EBI] GO:0005802        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006891        [VIEW IN EMBL-EBI] GO:0007049        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016192        [VIEW IN EMBL-EBI] GO:0016197        [VIEW IN EMBL-EBI] GO:0016482        [VIEW IN EMBL-EBI] GO:0022402        [VIEW IN EMBL-EBI] GO:0022607        [VIEW IN EMBL-EBI] GO:0030008        [VIEW IN EMBL-EBI] GO:0031410        [VIEW IN EMBL-EBI] GO:0031982        [VIEW IN EMBL-EBI] GO:0031984        [VIEW IN EMBL-EBI] GO:0032506        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034498        [VIEW IN EMBL-EBI] GO:0042147        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044431        [VIEW IN EMBL-EBI] GO:0044433        [VIEW IN EMBL-EBI] GO:0044440        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0048193        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051301        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0061640        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0097708        [VIEW IN EMBL-EBI] GO:0098791        [VIEW IN EMBL-EBI] GO:0099023        [VIEW IN EMBL-EBI] GO:1902410        [VIEW IN EMBL-EBI] GO:1903047        [VIEW IN EMBL-EBI] GO:1990071        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGAACTATTTGGCTCAGTTCCAGACGGTTCAAAATTCATGCAATCGCGTCGTCGCCGCAGTGGAAGATGTGTCTGATCTGTGGCCCACGGTTAAAGGTTTGTTTGAAGAACATCAGCCACTCAAAAGAGCCTTCTTGACAAACAGGACTCGTAATCCTGTGCTCGTTGAGAACTTGCCCGTTGAGTTTATATTAACTACAGACGCCAGACTTCGAAGTCGACCTCCGCAAGAGCAGTACTTGTTCTGGTTCCGAGAACCATATGCGACTATTGTTCTTGTCACCTGTGAGGATCTTGATGAGTTTAAAAATATTCTTAAACCACGTCTCAAATTAATTGTTCAGAACGATGAGAGGGAATGGTTTATTGTATTTGTATCTAAGGCTCATCCAAGTAATGATCAAGCAACTAAATCTGTGAAGAAAGTGTATGCCAAGCTTGAAGTTGATTTCAGTTCTAAAAAGAGAGAAAGGTGCTGTAAGCTGGATTTACATGGCCCCAACGCAAATTTTTGGGAGGATCTAGAATTAAAGATTACCGAGTGCATCAGGAATACCTTGGATAGGCGCGTTCTATTTTACGAGGATGAGATACGCAAGCTGACCGAGCAGCGGTTTATGCCAATATGGAACTTTTGTAATTTCTTCATCCTGAAGGAAAGTTTGGCTTTTATATTTGAGATGGCTCATCTTCATGAAGATGCATTACGTGAATATGATGAACTAGAGCTCTGCTATTTGGAAACAGTTAATATGCCTGGAAAACAGAGGGAATTTGGAGGATTCGATAGTGAAGATGACCAAGCAACGCTACTGAAACCAGGAAGCAAACCATTGACACAGATTGTGCAAGATGATTCTTTTAGAGAATTCGATTTTAGACAGTATCTCTTTGCCTGTCAATCAAAGCTGTTGTTCAAGTTGAATCGTCCTTCTGAAGTTTCATCCAGGGGCTACTCTTTTGTTATCAGTTTTGCAAAGGCCTTGACGCTCCATGAGAGTGTGCTTCCCTTCTGTTTGCGGGAAGTTTGGATAATTACTGCGTGTTTAGCGCTGCTCGATGCAACTGCTTCTCATCACCATAATGGAACTGTTGCACCTGATATTGAGAAGGAATTCTACCGTCTTCAGGGTGATCTCTTTTCCCTCGCACGGGTTAAGTTCATGAGACTTGGATATCTGATAGGATATGGAACAGACATAGAAAAAAGTCCACTTAACAGTGCTTGTCTCAGTATGCTGCCTTGGCCAAAACCGGCAGTCTGGCCATCTCTTCCACCAGATGCTTCCTCTGAGGTGCTTGAAAAAGAAAAGACTATTCTTCAAGCAAGTTCAAGGACCAAGCACTTTGGTATTCAACGGAAACCTTTACCCCTTGAACCATCTGTCCTTCTACGTGTGGCTAACAGAAGAAGGGCTTCTCTTTCTACTGGAAATATTCCTGAAATATTTGATGGCCGCCCAGGTTTTACTGAAGGATCAGGTTTAGAAGCGTCTCCGAGAACACCTTCATCACTTAAAGTACAAGCACCTCCCATGTCAAGAACAAATTCTTCACCTGGAAATTTTGAGAGTCCGCTAGATAGGCCTATGAGGCTTGCTGAAATTTTTGTTGCAGCTGAGCACGCTCTGCGGCTTACCATTTCAGATCAAGATTTGTTAAAGGCATTGTCATCTACTCAGGATTTCGAGCATAAATATCTTAATCTAACCAAAGGTGCTGCCGAAAACTATCACCGTTCTTGGTGGAAGAGACATGGAGTCGTTCTTGATGGTGAAATTGCAGCTGTCTGTTTCAAGCACGGGAAATATGATTTGGCTGCAAACTCTTATGAAAAAGTTTGTGCCCTTTATGCGGGTGAAAGATGGCAAGATTTACTGGCAGAAGTCTTGCCCAATTTAGCTGAGTGTCAAAAGAATCTTAATGATCAAGCTGGATACATATCATCTTGTGTTAGGCTACTTTCGTTGGATAAGGGTCTATTCTCGCCCAAGGAGCGGCAAGCTTTTCAGATTGAGGTTGTCAATCTTGCACACAGTGAAATGAAAAACCCAGTTCCCTTAGATGTTTCATCGTTGATCACATTTTCTGGAAACACTGGCCCTCCGCTTCAGTTGTGTGATGGAGACCCTGGAACTCTATCAGTTACTGTGTGGAGTGGCTTTCCTGATGATATCACCCTTGATTCACTTAGTCTTACCTTAGTAGCCACCAACAACACCGATGAAGGCGGCCAGGCCTTAAAGAGTTCTGCTGCAACTGTTCTAAAGCCCGGAAGGAATACTATCACATTTGCTCTGCCTCCACAAAAACCTGGTTCCTATGTCTTAGGAGTCGTTACTGGTCAGATTGGACGCTTGAGATTCAGGTCTCACAGCTTTTCAAAAGGTGGTCCTGCAGATACTGATGACTTCATGAGCTATGAAAAGCCAACCAGACCTATCCTGAAGGTTTCCAAACCAAGAGCTCTGGTTGATCTTGCTTCAGCGGTATCTTCTGCGTTGCTTATAAATGAAGCCCAGTGGATTGGTATCATAGTACATCCTATTAACTACTCACTGAAAGGCGCCATCTTGCACATTGATACTGGTCCGGGGCTAAAGATTGAAGACTCATACGGCATTGAGATGGAGAGATACATGGCAACAGATTGTGATGCTGGTGCATCAAAAGCCGAAGTTTCTGTAGAAGATAGCCCTGTCTCTCCAAAACGGGATTCAGAGGTGCTTAATCTCTGCGATGGTAAAATAGTTTTCTCAGAGTGGGCAAGCAATGTGAGTTCCATTCTCTGGGTCCCCGTTCGTGCATTGAGTGAGAAGCTTGCCAGAGGCTCATCTTCAGTTACTCCACTCAAACAAGATATTCTAGAGGGAATGAGAACTGTAGCTTTGAAACTTGAATTTGGGGTGAATCATAACCAGATATTTGAGAGAACCGTAGCGGCACATTTTACGGACCCTTTTGACGTGACTACAAGGGTGGTAAACAAATGCAATGATGGCACTTTGGTCTTGCAGGTCATGCTACACTCCCTTGTCAAGGCCAACTTGATAGTTCTTGATACTTGGCTTGATCTTCAAGATGGATTTGTTCATGAAAAAAGTGATGGAAGACCTACTTCAACATTCTTTCCGCTTGTTGTGTCTCCGGGGTCTAGAGCAGCCGTTGTGTTCAATATATCCCTAGAGAAGACCATGTCATTAGGGAAAGATTTGCAACTACCAGAGAGCATTCTGAATATCAAATATGAAATCAATGGAGATAGAGCCACTGGGGCACACAAACCAGTTGATGCAGATCACTCTGGAGCTGATTCTGAAAGGAGAGCTTTGGTGTTCAAGAGTGCTATCGTTTTGCAGCGTCCAGTGCTTGATCCTTGCCTTACAGTTGGATTTCTCCCACTTCCTTCTGATGGTCTTAGGGTCGGGAAACTTACTACCATAAAGTGGAGAGTCGAGAGGCTGAAAGAGCTCAAGAGAAGTGAAGCCGTCGAAGAACATGATGAGGTGTTATACGAAGTCAATGCAAATTCGGCGAATTGGATGATTGCAGGTAGAAAGAGAGGCCATGTGTCTCTCTCAGAAGAGAAAGGTTCAAGAGTAGTAATCTCGATACTATGTGTCCCATTAGTTGCGGGTTATGTACGTCCACCTCAGCTCAGTTTGCCGAACGTGGAAGAAGAAAACGTAAGAAGCAATCCACCGGGTCCTCACTTAGTGTGTGTCTTGCCTCCATTTCTCAGTTCTTCCTATTGCGTCCCTGTCAAGTAG

Protein:   MANYLAQFQTVQNSCNRVVAAVEDVSDLWPTVKGLFEEHQPLKRAFLTNRTRNPVLVENLPVEFILTTDARLRSRPPQEQYLFWFREPYATIVLVTCEDLDEFKNILKPRLKLIVQNDEREWFIVFVSKAHPSNDQATKSVKKVYAKLEVDFSSKKRERCCKLDLHGPNANFWEDLELKITECIRNTLDRRVLFYEDEIRKLTEQRFMPIWNFCNFFILKESLAFIFEMAHLHEDALREYDELELCYLETVNMPGKQREFGGFDSEDDQATLLKPGSKPLTQIVQDDSFREFDFRQYLFACQSKLLFKLNRPSEVSSRGYSFVISFAKALTLHESVLPFCLREVWIITACLALLDATASHHHNGTVAPDIEKEFYRLQGDLFSLARVKFMRLGYLIGYGTDIEKSPLNSACLSMLPWPKPAVWPSLPPDASSEVLEKEKTILQASSRTKHFGIQRKPLPLEPSVLLRVANRRRASLSTGNIPEIFDGRPGFTEGSGLEASPRTPSSLKVQAPPMSRTNSSPGNFESPLDRPMRLAEIFVAAEHALRLTISDQDLLKALSSTQDFEHKYLNLTKGAAENYHRSWWKRHGVVLDGEIAAVCFKHGKYDLAANSYEKVCALYAGERWQDLLAEVLPNLAECQKNLNDQAGYISSCVRLLSLDKGLFSPKERQAFQIEVVNLAHSEMKNPVPLDVSSLITFSGNTGPPLQLCDGDPGTLSVTVWSGFPDDITLDSLSLTLVATNNTDEGGQALKSSAATVLKPGRNTITFALPPQKPGSYVLGVVTGQIGRLRFRSHSFSKGGPADTDDFMSYEKPTRPILKVSKPRALVDLASAVSSALLINEAQWIGIIVHPINYSLKGAILHIDTGPGLKIEDSYGIEMERYMATDCDAGASKAEVSVEDSPVSPKRDSEVLNLCDGKIVFSEWASNVSSILWVPVRALSEKLARGSSSVTPLKQDILEGMRTVALKLEFGVNHNQIFERTVAAHFTDPFDVTTRVVNKCNDGTLVLQVMLHSLVKANLIVLDTWLDLQDGFVHEKSDGRPTSTFFPLVVSPGSRAAVVFNISLEKTMSLGKDLQLPESILNIKYEINGDRATGAHKPVDADHSGADSERRALVFKSAIVLQRPVLDPCLTVGFLPLPSDGLRVGKLTTIKWRVERLKELKRSEAVEEHDEVLYEVNANSANWMIAGRKRGHVSLSEEKGSRVVISILCVPLVAGYVRPPQLSLPNVEEENVRSNPPGPHLVCVLPPFLSSSYCVPVK